allensdk.internal.mouse_connectivity.projection_thumbnail.visualization_utilities module¶
- allensdk.internal.mouse_connectivity.projection_thumbnail.visualization_utilities.blend(image_stack, weight_stack)[source]¶
- Parameters:
- image_stack :: list of np.ndarray
The images to be blended. Shapes cannot differ
- weight_stack :: list of np.ndarray
The weight of each image at each pixel. Will be normalized.
- allensdk.internal.mouse_connectivity.projection_thumbnail.visualization_utilities.convert_discrete_colormap(data, cm_name='custom', color_names=None)[source]¶
Generates a matplotlib continuous colormap on [0, 1] from a discrete colormap at N evenly spaced points.
- Parameters:
- datalist of list
Sublists are [r, g, b].
- Returns:
- matplotlib.colors.LinearSegmentedColormap
Gamma is 1. Output space is 3 X [0, 1]
- allensdk.internal.mouse_connectivity.projection_thumbnail.visualization_utilities.minmax_norm(data)[source]¶