allensdk.config package¶

Subpackages¶

  • allensdk.config.app package
    • Submodules
      • allensdk.config.app.application_config module
        • ApplicationConfig
    • Module contents
  • allensdk.config.model package
    • Subpackages
      • allensdk.config.model.formats package
        • Submodules
        • Module contents
    • Submodules
      • allensdk.config.model.description module
        • Description
      • allensdk.config.model.description_parser module
        • DescriptionParser
    • Module contents

Submodules¶

  • allensdk.config.manifest module
    • Manifest
      • Manifest.DIR
      • Manifest.DIRNAME
      • Manifest.FILE
      • Manifest.VERSION
      • Manifest.add_file()
      • Manifest.add_path()
      • Manifest.add_paths()
      • Manifest.as_dataframe()
      • Manifest.check_dir()
      • Manifest.create_dir()
      • Manifest.get_format()
      • Manifest.get_path()
      • Manifest.load_config()
      • Manifest.log
      • Manifest.resolve_paths()
      • Manifest.safe_make_parent_dirs()
      • Manifest.safe_mkdir()
    • ManifestVersionError
      • ManifestVersionError.outdated
  • allensdk.config.manifest_builder module
    • ManifestBuilder
      • ManifestBuilder.add_path()
      • ManifestBuilder.add_section()
      • ManifestBuilder.as_dataframe()
      • ManifestBuilder.df_columns
      • ManifestBuilder.from_dataframe()
      • ManifestBuilder.get_config()
      • ManifestBuilder.get_manifest()
      • ManifestBuilder.set_version()
      • ManifestBuilder.write_json_file()
      • ManifestBuilder.write_json_string()

Module contents¶

allensdk.config.enable_console_log(level=None)[source]¶

configure allensdk logging to output to the console.

Parameters:
levelint

logging level 0-50 (logging.INFO, logging.DEBUG, etc.)

Notes

See: Logging Cookbook

Contents

  • Install Guide
  • Data Resources
    • Brain Observatory
    • Cell Types
    • Mouse Connectivity
    • Reference Space
    • API Access
    • Visual Coding – Neuropixels
    • GETTING STARTED
    • TUTORIALS
    • DOCUMENTATION
    • VISUAL BEHAVIOR OPTICAL PHYSIOLOGY DATASETS
    • BEHAVIORAL TRAINING
    • 2-PHOTON IMAGING DURING BEHAVIOR
    • SESSION STRUCTURE
    • DATA PROCESSING
    • QUALITY CONTROL
    • SUMMARY OF AVAILABLE DATA
    • DATA FILE CHANGELOG
  • Models
    • Generalized LIF
    • Biophysical
  • Examples
  • Authors
  • Source Documentation
    • allensdk.api package
    • allensdk.brain_observatory package
    • allensdk.config package
    • allensdk.core package
    • allensdk.ephys package
    • allensdk.internal package
    • allensdk.model package
    • allensdk.morphology package
    • allensdk.mouse_connectivity package
    • allensdk.test_utilities package
    • allensdk.deprecated module
  • Github Profile

Questions

For help with problems or questions using the AllenSDK, please create an issue on Github's issue tracker or submit your question to StackOverflow with the 'allen-sdk' tag.

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