allensdk.internal.mouse_connectivity.projection_thumbnail package

Submodules

• allensdk.internal.mouse_connectivity.projection_thumbnail.generate_projection_strip module
  • apply_colormap()
  • blend_with_background()
  • do_blur()
  • handle_output_image()
  • max_cb()
  • run()
  • simple_rotation()
• allensdk.internal.mouse_connectivity.projection_thumbnail.image_sheet module
  • ImageSheet
    • ImageSheet.append()
    • ImageSheet.apply()
    • ImageSheet.build_from_image()
    • ImageSheet.copy()
    • ImageSheet.get_output()
• allensdk.internal.mouse_connectivity.projection_thumbnail.projection_functions module
  • convert_axis()
  • max_projection()
  • template_projection()
• allensdk.internal.mouse_connectivity.projection_thumbnail.visualization_utilities module
  • blend()
  • convert_discrete_colormap()
  • minmax_norm()
  • normalize_intensity()
  • sitk_safe_ln()
• allensdk.internal.mouse_connectivity.projection_thumbnail.volume_projector module
  • VolumeProjector
    • VolumeProjector.build_rotation_transform()
    • VolumeProjector.extract()
    • VolumeProjector.fixed_factory()
    • VolumeProjector.rotate()
    • VolumeProjector.rotate_and_extract()
    • VolumeProjector.safe_factory()
• allensdk.internal.mouse_connectivity.projection_thumbnail.volume_utilities module
  • sitk_get_center()
  • sitk_get_diagonal_length()
  • sitk_get_image_parameters()
  • sitk_get_size_parity()
  • sitk_paste_into_center()

Module contents