allensdk.brain_observatory.behavior.data_objects package

Subpackages

• allensdk.brain_observatory.behavior.data_objects.cell_specimens package
  • Subpackages
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces package
      • Submodules
      • Module contents
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.cell_specimens module
      • CellSpecimenMeta
      • CellSpecimens
      • EventsParams
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.events module
      • Events
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.rois_mixin module
      • RoisMixin
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.eye_tracking package
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.eye_tracking.eye_tracking_table module
      • EyeTrackingTable
      • get_lost_frames()
    • allensdk.brain_observatory.behavior.data_objects.eye_tracking.rig_geometry module
      • Coordinates
      • RigGeometry
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.metadata package
  • Subpackages
    • allensdk.brain_observatory.behavior.data_objects.metadata.behavior_metadata package
      • Submodules
      • Module contents
    • allensdk.brain_observatory.behavior.data_objects.metadata.ophys_experiment_metadata package
      • Subpackages
      • Submodules
      • Module contents
    • allensdk.brain_observatory.behavior.data_objects.metadata.subject_metadata package
      • Submodules
      • Module contents
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.metadata.behavior_ophys_metadata module
      • BehaviorOphysMetadata
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.running_speed package
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.running_speed.multi_stim_running_processing module
      • multi_stim_running_df_from_raw_data()
    • allensdk.brain_observatory.behavior.data_objects.running_speed.running_acquisition module
      • RunningAcquisition
    • allensdk.brain_observatory.behavior.data_objects.running_speed.running_processing module
      • calc_deriv()
      • deg_to_dist()
      • get_running_df()
    • allensdk.brain_observatory.behavior.data_objects.running_speed.running_speed module
      • RunningSpeed
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.stimuli package
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.stimuli.fingerprint_stimulus module
      • FingerprintStimulus
    • allensdk.brain_observatory.behavior.data_objects.stimuli.presentations module
      • Presentations
      • get_spontaneous_block_indices()
    • allensdk.brain_observatory.behavior.data_objects.stimuli.stimuli module
      • Stimuli
    • allensdk.brain_observatory.behavior.data_objects.stimuli.stimulus_templates module
      • StimulusImage
      • StimulusImageFactory
      • StimulusMovieFrameFactory
      • StimulusMovieTemplateFactory
      • StimulusTemplate
      • StimulusTemplateFactory
    • allensdk.brain_observatory.behavior.data_objects.stimuli.templates module
      • Templates
    • allensdk.brain_observatory.behavior.data_objects.stimuli.util module
      • calculate_monitor_delay()
      • convert_filepath_caseinsensitive()
      • get_image_set_name()
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.timestamps package
  • Subpackages
    • allensdk.brain_observatory.behavior.data_objects.timestamps.stimulus_timestamps package
      • Submodules
      • Module contents
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.timestamps.ophys_timestamps module
      • OphysTimestamps
      • OphysTimestampsMultiplane
    • allensdk.brain_observatory.behavior.data_objects.timestamps.util module
      • calc_frame_rate()
  • Module contents
• allensdk.brain_observatory.behavior.data_objects.trials package
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.trials.trial module
      • Trial
    • allensdk.brain_observatory.behavior.data_objects.trials.trials module
      • Trials
  • Module contents

Submodules

• allensdk.brain_observatory.behavior.data_objects.licks module
  • Licks
    • Licks.from_nwb()
    • Licks.from_stimulus_file()
    • Licks.to_nwb()
• allensdk.brain_observatory.behavior.data_objects.motion_correction module
  • MotionCorrection
    • MotionCorrection.from_data_file()
    • MotionCorrection.from_nwb()
    • MotionCorrection.to_nwb()
• allensdk.brain_observatory.behavior.data_objects.projections module
  • Projections
    • Projections.avg_projection
    • Projections.from_json()
    • Projections.from_lims()
    • Projections.from_nwb()
    • Projections.max_projection
    • Projections.to_nwb()
• allensdk.brain_observatory.behavior.data_objects.rewards module
  • Rewards
    • Rewards.from_nwb()
    • Rewards.from_stimulus_file()
    • Rewards.to_nwb()
• allensdk.brain_observatory.behavior.data_objects.task_parameters module
  • BehaviorStimulusType
    • BehaviorStimulusType.GRATING
    • BehaviorStimulusType.IMAGES
  • StimulusDistribution
    • StimulusDistribution.EXPONENTIAL
    • StimulusDistribution.GEOMETRIC
  • TaskParameters
    • TaskParameters.auto_reward_volume
    • TaskParameters.blank_duration_sec
    • TaskParameters.from_nwb()
    • TaskParameters.from_stimulus_file()
    • TaskParameters.image_set
    • TaskParameters.n_stimulus_frames
    • TaskParameters.omitted_flash_fraction
    • TaskParameters.response_window_sec
    • TaskParameters.reward_volume
    • TaskParameters.session_type
    • TaskParameters.stimulus
    • TaskParameters.stimulus_distribution
    • TaskParameters.stimulus_duration_sec
    • TaskParameters.stimulus_name
    • TaskParameters.task
    • TaskParameters.to_nwb()
  • TaskType
    • TaskType.CHANGE_DETECTION

Module contents