allensdk.brain_observatory.behavior.data_objects.cell_specimens package

Subpackages

• allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces package
  • Submodules
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces.corrected_fluorescence_traces module
      • CorrectedFluorescenceTraces
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces.demixed_traces module
      • DemixedTraces
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces.dff_traces module
      • DFFTraces
    • allensdk.brain_observatory.behavior.data_objects.cell_specimens.traces.neuropil_traces module
      • NeuropilTraces
  • Module contents

Submodules

• allensdk.brain_observatory.behavior.data_objects.cell_specimens.cell_specimens module
  • CellSpecimenMeta
    • CellSpecimenMeta.emission_lambda
    • CellSpecimenMeta.from_json()
    • CellSpecimenMeta.from_lims()
    • CellSpecimenMeta.from_nwb()
    • CellSpecimenMeta.imaging_plane
  • CellSpecimens
    • CellSpecimens.corrected_fluorescence_traces
    • CellSpecimens.demixed_traces
    • CellSpecimens.dff_traces
    • CellSpecimens.events
    • CellSpecimens.from_json()
    • CellSpecimens.from_lims()
    • CellSpecimens.from_nwb()
    • CellSpecimens.meta
    • CellSpecimens.neuropil_traces
    • CellSpecimens.roi_masks
    • CellSpecimens.segmentation_mask_image
    • CellSpecimens.table
    • CellSpecimens.to_nwb()
  • EventsParams
    • EventsParams.filter_n_time_steps
    • EventsParams.filter_scale_seconds
• allensdk.brain_observatory.behavior.data_objects.cell_specimens.events module
  • Events
    • Events.from_data_file()
    • Events.from_nwb()
    • Events.to_nwb()
• allensdk.brain_observatory.behavior.data_objects.cell_specimens.rois_mixin module
  • RoisMixin
    • RoisMixin.filter_and_reorder()

Module contents