allensdk.internal.core package

Submodules

• allensdk.internal.core.lims_pipeline_module module
  • PipelineModule
    • PipelineModule.args
    • PipelineModule.input_data()
    • PipelineModule.write_output_data()
  • default_argument_parser()
  • run_module()
• allensdk.internal.core.lims_utilities module
  • append_well_known_file()
  • connect()
  • convert_from_titan_linux()
  • get_input_json()
  • get_well_known_file_by_name()
  • get_well_known_file_by_type()
  • get_well_known_files_by_name()
  • get_well_known_files_by_type()
  • linux_to_windows()
  • query()
  • safe_system_path()
  • select()
• allensdk.internal.core.mouse_connectivity_cache_prerelease module
  • MouseConnectivityCachePrerelease
    • MouseConnectivityCachePrerelease.EXPERIMENTS_PRERELEASE_KEY
    • MouseConnectivityCachePrerelease.STORAGE_DIRECTORIES_PRERELEASE_KEY
    • MouseConnectivityCachePrerelease.add_manifest_paths()
    • MouseConnectivityCachePrerelease.filter_experiments()
    • MouseConnectivityCachePrerelease.get_experiments()
• allensdk.internal.core.simpletree module
  • SimpleTree
    • SimpleTree.ancestor_ids()
    • SimpleTree.ancestors()
    • SimpleTree.child_ids()
    • SimpleTree.children()
    • SimpleTree.descendant_ids()
    • SimpleTree.descendants()
    • SimpleTree.node()
    • SimpleTree.node_ids()
    • SimpleTree.nodes()
    • SimpleTree.parent()
    • SimpleTree.parent_id()
• allensdk.internal.core.swc module
  • Marker
    • Marker.CUT_DENDRITE
    • Marker.NO_RECONSTRUCTION
    • Marker.SPACING
  • read_marker_file()
  • read_swc()

Module contents

allensdk.internal.core provides general modules for interacting with on-prem resources