allensdk.core.ontology module¶
- class allensdk.core.ontology.Ontology(df)[source]¶
Bases:
object
Note
Deprecated from 0.12.5 Ontology has been replaced by StructureTree.
- get_child_ids(structure_ids)[source]¶
Find the set of ids that are immediate children of one or more structures.
- Parameters:
- structure_ids: iterable
Any iterable type that contains structure ids that can be cast to integers.
- Returns:
- set
Set of child structure ids
- get_children(structure_ids)[source]¶
Find the set of structures that are immediate children of one or more structures.
- Parameters:
- structure_ids: iterable
Any iterable type that contains structure ids that can be cast to integers.
- Returns:
- pandas.DataFrame
Set of child structures
- get_descendant_ids(structure_ids)[source]¶
Find the set of the ids of structures that are descendants of one or more structures. The returned set will include the input structure ids.
- Parameters:
- structure_ids: iterable
Any iterable type that contains structure ids that can be cast to integers.
- Returns:
- set
Set of descendant structure ids.
- get_descendants(structure_ids)[source]¶
Find the set of structures that are descendants of one or more structures. The returned set will include the input structures.
- Parameters:
- structure_ids: iterable
Any iterable type that contains structure ids that can be cast to integers.
- Returns:
- pandas.DataFrame
Set of descendant structures.