allensdk.brain_observatory.vbn_2022.metadata_writer package¶

Submodules¶

  • allensdk.brain_observatory.vbn_2022.metadata_writer.dataframe_manipulations module
    • strip_substructure_acronym_df()
  • allensdk.brain_observatory.vbn_2022.metadata_writer.lims_queries module
    • channels_table_from_ecephys_session_id_list()
    • get_list_of_bad_probe_ids()
    • probes_table_from_ecephys_session_id_list()
    • session_tables_from_ecephys_session_id_list()
    • units_table_from_ecephys_session_id_list()
  • allensdk.brain_observatory.vbn_2022.metadata_writer.metadata_writer module
    • VBN2022MetadataWriterClass
      • VBN2022MetadataWriterClass.default_output_schema
      • VBN2022MetadataWriterClass.default_schema
      • VBN2022MetadataWriterClass.run()
      • VBN2022MetadataWriterClass.write_df()
  • allensdk.brain_observatory.vbn_2022.metadata_writer.schemas module
    • VBN2022MetadataWriterInputSchema
      • VBN2022MetadataWriterInputSchema.dump_fields
      • VBN2022MetadataWriterInputSchema.exclude
      • VBN2022MetadataWriterInputSchema.fields
      • VBN2022MetadataWriterInputSchema.load_fields
      • VBN2022MetadataWriterInputSchema.opts
      • VBN2022MetadataWriterInputSchema.validate_paths()

Module contents¶

Contents

  • Install Guide
  • Data Resources
    • Brain Observatory
    • Cell Types
    • Mouse Connectivity
    • Reference Space
    • API Access
    • Visual Coding – Neuropixels
    • GETTING STARTED
    • TUTORIALS
    • DOCUMENTATION
    • VISUAL BEHAVIOR OPTICAL PHYSIOLOGY DATASETS
    • BEHAVIORAL TRAINING
    • 2-PHOTON IMAGING DURING BEHAVIOR
    • SESSION STRUCTURE
    • DATA PROCESSING
    • QUALITY CONTROL
    • SUMMARY OF AVAILABLE DATA
    • DATA FILE CHANGELOG
  • Models
    • Generalized LIF
    • Biophysical
  • Examples
  • Authors
  • Source Documentation
    • allensdk.api package
    • allensdk.brain_observatory package
    • allensdk.config package
    • allensdk.core package
    • allensdk.ephys package
    • allensdk.internal package
    • allensdk.model package
    • allensdk.morphology package
    • allensdk.mouse_connectivity package
    • allensdk.test_utilities package
    • allensdk.deprecated module
  • Github Profile

Questions

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