allensdk.brain_observatory.ecephys.write_nwb.schemas module¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.BaseBehaviorSessionDataSchema(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.BaseNeuropixelsSchema(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
ArgSchema
Base schema for writing NWB files for projects with behavior + ecephys
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.Channel(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.InvalidEpoch(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.Lfp(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.OutputSchema(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.Probe(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.ProbeOutputs(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.SessionMetadata(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.Unit(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
RaisingSchema
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶
- class allensdk.brain_observatory.ecephys.write_nwb.schemas.VCNInputSchema(*, only: types.StrSequenceOrSet | None = None, exclude: types.StrSequenceOrSet = (), many: bool = False, context: dict | None = None, load_only: types.StrSequenceOrSet = (), dump_only: types.StrSequenceOrSet = (), partial: bool | types.StrSequenceOrSet | None = None, unknown: str | None = None)[source]¶
Bases:
BaseNeuropixelsSchema
Input schema for visual coding neuropixels project
- dump_fields: Dict[str, ma_fields.Field]¶
- exclude: set[Any] | MutableSet[Any]¶
- fields: Dict[str, ma_fields.Field]¶
Dictionary mapping field_names ->
Field
objects
- load_fields: Dict[str, ma_fields.Field]¶
- opts: SchemaOpts = <marshmallow.schema.SchemaOpts object>¶