allensdk.brain_observatory.ecephys.file_io.ecephys_sync_dataset module

class allensdk.brain_observatory.ecephys.file_io.ecephys_sync_dataset.EcephysSyncDataset

Bases: Dataset

extract_frame_times(strategy, photodiode_cycle=60, frame_keys=('frames', 'stim_vsync', 'vsync_stim'), photodiode_keys=('photodiode', 'stim_photodiode'), trim_discontiguous_frame_times=True)

extract_frame_times_from_photodiode(photodiode_cycle=60, frame_keys=('frames', 'stim_vsync', 'vsync_stim'), photodiode_keys=('photodiode', 'stim_photodiode'), trim_discontiguous_frame_times=True)

extract_frame_times_from_vsyncs(photodiode_cycle=60, frame_keys=('frames', 'stim_vsync', 'vsync_stim'), photodiode_keys=('photodiode', 'stim_photodiode'))

extract_led_times(keys=('LED_sync', 'opto_trial'), fallback_line=18)

classmethod factory(path)

Build a new SyncDataset.

Parameters:

pathstr

Filesystem path to the h5 file containing sync information to be loaded.

remove_zero_frames(frame_times)

property sample_frequency