allensdk.internal.pipeline_modules.run_annotated_region_metrics module

Run annotated region metrics calculations

allensdk.internal.pipeline_modules.run_annotated_region_metrics.debug(region_id, storage_directory='./', local=True, sdk_path='/data/informatics/CAM/isi_metrics/allensdk', script_path='/data/informatics/CAM/isi_metrics/allensdk/allensdk/internal/pipeline_modules/run_annotated_region_metrics.py', lims_host='lims2')[source]
allensdk.internal.pipeline_modules.run_annotated_region_metrics.load_arrays(h5_file)[source]
allensdk.internal.pipeline_modules.run_annotated_region_metrics.main()[source]