allensdk.internal.api.behavior_ophys_api module¶

class allensdk.internal.api.behavior_ophys_api.BehaviorOphysLimsApi(ophys_experiment_id: int, lims_credentials: Optional[allensdk.core.authentication.DbCredentials] = None)[source]¶

Bases: allensdk.internal.api.ophys_lims_api.OphysLimsApi, allensdk.brain_observatory.behavior.behavior_ophys_api.BehaviorOphysApiBase

classmethod get_api_list_by_container_id(container_id)[source]¶

get_average_projection(self, image_api=None)[source]¶

get_behavior_session_uuid(self)[source]¶

get_behavior_stimulus_file(self)[source]¶

static get_containers_df(only_passed=True)[source]¶

get_corrected_fluorescence_traces(self)[source]¶

get_dff_traces(self)[source]¶

get_experiment_container_id(self)[source]¶

get_extended_trials(self)[source]¶

get_eye_tracking(self, z_threshold: float = 3.0, dilation_frames: int = 2)[source]¶

get_eye_tracking_filepath(self)[source]¶

get_licks(self)[source]¶

get_metadata(self)[source]¶

get_motion_correction(self)[source]¶

get_nwb_filepath(self)[source]¶

static get_ophys_experiment_df()[source]¶

get_ophys_frame_rate(self)[source]¶

get_ophys_timestamps(self)[source]¶

get_rewards(self)[source]¶

get_running_data_df(self)[source]¶

get_running_speed(self)[source]¶

get_stimulus_frame_rate(self)[source]¶

get_stimulus_presentations(self)[source]¶

get_stimulus_rebase_function(self)[source]¶

get_stimulus_templates(self)[source]¶

get_stimulus_timestamps(self)[source]¶

get_sync_data(self)[source]¶

get_sync_licks(self)[source]¶

get_task_parameters(self)[source]¶

get_trials(self)[source]¶